PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN36734.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 234aa    MW: 25658.3 Da    PI: 7.3636
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN36734.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86e-1177124454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL  A + + +L
  KHN36734.1  77 SKACREKLRRDRLNDKFVELGSILEPG---RPPKTDKASILIDAARMVTQL 124
                 6789**********************8...89************9999888 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.7673124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-1176147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-877124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.62E-1278148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-779130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.34E-781127No hitNo description
CDDcd146860.00476139171No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MVSPENSNWL FDYPLIDDDV IPVGDSSFAV SASTFSWPPP PANVSVEIDT SLGDSDGLKN  60
PALKKRTKSD SSTASSSKAC REKLRRDRLN DKFVELGSIL EPGRPPKTDK ASILIDAARM  120
VTQLRDEALK LKDSNTSLQE KIKELKAEKN ELRDEKQRLK AEKEKLEVQV KSMNAQPAFL  180
PPPPAIPAAF APQGQAPGNK LVPFISYPGV AMWQFMPPAA VDTSQDHVLR PPVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311210.0KT031121.1 Glycine max clone HN_CCL_83 bHLH transcription factor (Glyma13g36260.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003543288.11e-168PREDICTED: transcription factor ILR3
SwissprotQ9FH371e-111ILR3_ARATH; Transcription factor ILR3
TrEMBLA0A0B2RX281e-169A0A0B2RX28_GLYSO; Transcription factor ILR3
STRINGGLYMA13G36260.11e-168(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16023486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-87bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]